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Bewertung und Feedback des Lernenden für Whole genome sequencing of bacterial genomes - tools and applications von Technical University of Denmark (DTU)

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1,144 Bewertungen
300 Bewertungen

Über den Kurs

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

Top-Bewertungen

AP

19. Juli 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

9. Juni 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

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176 - 200 von 304 Bewertungen für Whole genome sequencing of bacterial genomes - tools and applications

von Eunice O

26. Sep. 2020

such an excellent practical course.

von Prince M

29. Okt. 2021

AMAZING COURSE THANK YOU VERY MUCH

von Tahir H

23. Dez. 2019

a good experience to get knowledge

von Jenny S

11. Juni 2020

really helpful and awesome course

von Manaswini K

9. Juni 2020

very useful ,thank you so much !!

von Rafael P

3. Juni 2018

Great Course!, congratulations!

von Ibrahim H

9. Nov. 2019

This lecuers exterimly useful.

von 1806071

8. Sep. 2019

Very very informative course

von Katarina E

30. März 2022

Very practical and useful!

von Pamela M

21. Apr. 2021

The best course about WGS!

von Mayur M

25. Juni 2020

Very Clear and informative

von Alexandru B

25. März 2018

very useful. thanks a lot.

von Moayad M A

21. Aug. 2017

very easy and interactive

von HARISH A 1

18. Juni 2020

i had finally learned

it

von Elhandi k

8. März 2022

wonderful cours !thanks

von Mark R

5. Juli 2018

简单明了,适合初学者和做细菌分型溯源的生物学家

von Pradeep K N

10. Juni 2022

EXCELLENT PROJECT WORK

von Verruchi G 1

15. Aug. 2020

ONE OF THE BEST COURSE

von Hanan K M H

4. Juli 2020

WONDERFUL >> THANK YOU

von Paola D S

1. Juli 2020

Useful, well planned!

von Johanna M

24. Apr. 2020

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von Mustafa R C

6. Jan. 2018

Very good, Thanks DTU

von CHUKKA S K

2. Dez. 2020

very understandable

von Reghan M

1. Sep. 2021

Its a great course

von Revathy B

26. Mai 2020

really informative