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Bewertung und Feedback des Lernenden für Whole genome sequencing of bacterial genomes - tools and applications von Technical University of Denmark (DTU)

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1,143 Bewertungen
300 Bewertungen

Über den Kurs

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

Top-Bewertungen

AP

19. Juli 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

9. Juni 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

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151 - 175 von 304 Bewertungen für Whole genome sequencing of bacterial genomes - tools and applications

von CHANCHALA A

3. Juli 2020

Feeling happy to learn all these courses for my future scope

von Hassan

12. Juni 2019

The Design, of course, is best as per researcher requirement.

von Adil M

1. Juli 2019

It was highly informative and interesting. I enjoyed alot

von Sufiyan M

27. Juli 2021

It was much informative and well prepared and conceptual

von Nagwan G E M

27. Aug. 2020

very useful and intersting course I finshed it in 4 days

von Sylvia D

17. Jan. 2021

very useful bioinformatics course with hand on training

von Marc B F

2. Mai 2018

The tools provided are very interesting and easy to use

von 劉時詠[Alex]

16. Dez. 2021

p​refect class, with proper training for the students

von julio a a j

15. März 2018

excelente curso me sirvió mucho para mi phD, gracias!

von Blanchard B

8. Mai 2022

All I expected to learn by following this course.

von Toyin A A

4. Sep. 2019

Its quite interesting and technical. i enjoyed it

von Mohamed H A E

19. Apr. 2020

I'm so happy for being one of your learners..

von Eloy H

28. Okt. 2018

It's a great course and it's not so difficult

von Dhanashree J A

20. Nov. 2020

Very well explained and interesting course.

von Zuzana K

25. Feb. 2020

Great course, I found it extremely helpful.

von Shimul D

30. Mai 2020

That was really awesome.Thanks to everyone

von Ahmed E A e

31. Okt. 2018

It isa fantastic course to spend your time

von Kris s

8. Dez. 2017

Genuinly seems fun.

Keep it up Team at TUD

von Valourstar M

15. Nov. 2017

developing skills in sequencing techniques

von Sonia R Q Q

16. Sep. 2019

a complete an interesting course, thanks!

von Md. A A

26. Juli 2020

Its an awesome and very helpful course

von Shakil A S

31. Aug. 2020

Too much tough but still too amazing!

von Sharma

25. Nov. 2019

Great course. Excellent for research.

von Dordia R

26. Juni 2020

practical and clear. Really helpful!

von Deepak S

2. Apr. 2020

Excellent course, great instructors.